PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Home  BLAST  Prediction  RegMap  ATRM  Download  Help  About  Links
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G332300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 335aa    MW: 36976.1 Da    PI: 8.4239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G332300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.4e-06218259955
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r RR+r  + +  LrellP++     +K +  ++ e++++YIk+Lq
  Aqcoe2G332300.1.p 218 DRLRRARKTENLKALRELLPHS-----RKGTILAVTEEVIDYIKYLQ 259
                        799******************8.....788899999**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.90E-5207263No hitNo description
PROSITE profilePS5088811.045209258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-7210269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-6212268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0098215264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MRIDALVGGA NSKTSGSYLR DIRGKNIIDE IIPLKVIAKS YLLRNVSNDI SHNQMSFLPT  60
GSTIIHGGLA KGMPQGLFLP VSSRARQTVF QFEEEIIGNN SGRASDFNAT DFSYNMDAKK  120
VSMLGANDNS HKDLQNSHVN LDKDYCDVPT GGELILYGEG GSQRKLLSAA NRNGDIDQNH  180
TLTAQEPIRE GIKSSQHPAV IPRPTPRKRA ATESSSSDRL RRARKTENLK ALRELLPHSR  240
KGTILAVTEE VIDYIKYLQL QIKVLTQSRL GGEPTFDPFI HLEGFGHYLL HDQMLNEPLE  300
MTIGRMMEGN MLAVTQLLET KGLYVMPIPS EPGP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.13e-21LJRHL1-like 1